Information for motif29


Reverse Opposite:

p-value:1e-12
log p-value:-2.903e+01
Information Content per bp:1.823
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif7.11%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.57%
Average Position of motif in Targets128.9 +/- 84.7bp
Average Position of motif in Background62.2 +/- 46.4bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TTCGCCGG
HTTTCCCASG

MA0161.1_NFIC/Jaspar

Match Rank:2
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TTCGCCGG
TTGGCA--

STAT6/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:3
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TTCGCCGG--
TTCTNMGGAA

MA0520.1_Stat6/Jaspar

Match Rank:4
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TTCGCCGG-----
ANTTCTCAGGAANNN

MA0506.1_NRF1/Jaspar

Match Rank:5
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TTCGCCGG---
TGCGCAGGCGC

E2F(E2F)/Cell-Cycle-Exp/Homer

Match Rank:6
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--TTCGCCGG--
TTTTCGCGCGAA

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TTCGCCGG---
CTGCGCATGCGC

NFY(CCAAT)/Promoter/Homer

Match Rank:8
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----TTCGCCGG
CCGATTGGCT--

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:TTCGCCGG-----
---RCCGGAARYN

Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:TTCGCCGG-----
---RCCGGAAGTD