Information for motif33


Reverse Opposite:

p-value:1e-11
log p-value:-2.613e+01
Information Content per bp:1.805
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif6.60%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.45%
Average Position of motif in Targets155.0 +/- 79.5bp
Average Position of motif in Background180.7 +/- 60.6bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0168.1_Sox14_2/Jaspar

Match Rank:1
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--AACAGAATTG---
CTCACACAATGGCGC

PB0141.1_Isgf3g_2/Jaspar

Match Rank:2
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----AACAGAATTG
GCAAAACATTACTA

PB0176.1_Sox5_2/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AACAGAATTG----
TATCATAATTAAGGA

MA0480.1_Foxo1/Jaspar

Match Rank:4
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----AACAGAATTG
TGTAAACAGGA---

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AACAGAATTG
AACCGANA--

PB0165.1_Sox11_2/Jaspar

Match Rank:6
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---AACAGAATTG-
NNCNNAACAATTNT

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan et al.)/Homer

Match Rank:7
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---AACAGAATTG
GTAAACAG-----

PB0016.1_Foxj1_1/Jaspar

Match Rank:8
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------AACAGAATTG
AAAGTAAACAAAAATT

PB0066.1_Sox17_1/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AACAGAATTG----
ATAAACAATTAAACA

MA0593.1_FOXP2/Jaspar

Match Rank:10
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----AACAGAATTG
AAGTAAACAAA----