Information for motif12


Reverse Opposite:

p-value:1e-11
log p-value:-2.549e+01
Information Content per bp:1.564
Number of Target Sequences with motif753.0
Percentage of Target Sequences with motif9.20%
Number of Background Sequences with motif1269.5
Percentage of Background Sequences with motif7.20%
Average Position of motif in Targets485.8 +/- 454.9bp
Average Position of motif in Background489.4 +/- 461.7bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.18
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Srebp1a(HLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.76
Offset:1
Orientation:forward strand
Alignment:GATCGCGCCA-
-ATCACCCCAT

Srebp2(HLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-GATCGCGCCA-
CNGTCACGCCAC

MA0596.1_SREBF2/Jaspar

Match Rank:3
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:GATCGCGCCA-
-ATCACCCCAT

MA0595.1_SREBF1/Jaspar

Match Rank:4
Score:0.70
Offset:1
Orientation:forward strand
Alignment:GATCGCGCCA-
-ATCACCCCAC

MA0161.1_NFIC/Jaspar

Match Rank:5
Score:0.69
Offset:5
Orientation:reverse strand
Alignment:GATCGCGCCA-
-----TGCCAA

POL006.1_BREu/Jaspar

Match Rank:6
Score:0.69
Offset:1
Orientation:forward strand
Alignment:GATCGCGCCA
-AGCGCGCC-

PB0164.1_Smad3_2/Jaspar

Match Rank:7
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GATCGCGCCA-----
TACGCCCCGCCACTCTG

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:8
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GATCGCGCCA-
-TTCCCGCCWG

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:9
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GATCGCGCCA
VDTTTCCCGCCA

PB0112.1_E2F2_2/Jaspar

Match Rank:10
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GATCGCGCCA-----
CCTTCGGCGCCAAAAGG