Information for motif30


Reverse Opposite:

p-value:1e-1
log p-value:-3.542e+00
Information Content per bp:1.669
Number of Target Sequences with motif53.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif38.2
Percentage of Background Sequences with motif0.49%
Average Position of motif in Targets525.6 +/- 495.1bp
Average Position of motif in Background619.5 +/- 337.7bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:1
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CGAGATCT
YSTTATCT

PB0126.1_Gata5_2/Jaspar

Match Rank:2
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----CGAGATCT-----
NNNCTGATATCTCNNNN

MA0160.1_NR4A2/Jaspar

Match Rank:3
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CGAGATCT-
-GTGACCTT

POL005.1_DPE/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CGAGATCT--
-NACATCTTN

PH0016.1_Cux1_1/Jaspar

Match Rank:5
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CGAGATCT------
TNAGNTGATCAACCGGT

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:6
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CGAGATCT----
--DGATCRATAN

MA0038.1_Gfi1/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CGAGATCT-
CNGTGATTTN

PH0037.1_Hdx/Jaspar

Match Rank:8
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CGAGATCT-----
AAGGCGAAATCATCGCA

PB0053.1_Rara_1/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CGAGATCT------
NNNGTGACCTTTGNNN

Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CGAGATCT--
YCTTATCWVN