Information for motif36


Reverse Opposite:

p-value:1e-3
log p-value:-7.891e+00
Information Content per bp:1.530
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.09%
Number of Background Sequences with motif4.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets178.0 +/- 106.6bp
Average Position of motif in Background724.8 +/- 390.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0095.2_YY1/Jaspar

Match Rank:1
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AACACGGCCA-
CAAGATGGCGGC

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:2
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AACACGGCCA
BTCAAGGTCA

MA0259.1_HIF1A::ARNT/Jaspar

Match Rank:3
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:AACACGGCCA
-GCACGTNC-

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:4
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AACACGGCCA
NTCAAGGTCA

MA0161.1_NFIC/Jaspar

Match Rank:5
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:AACACGGCCA-
-----TGCCAA

MA0071.1_RORA_1/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AACACGGCCA
ATCAAGGTCA

MA0505.1_Nr5a2/Jaspar

Match Rank:7
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---AACACGGCCA--
AAGTTCAAGGTCAGC

MA0592.1_ESRRA/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AACACGGCCA--
-CCAAGGTCACA

MA0133.1_BRCA1/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AACACGGCCA
ACAACAC-----

PB0195.1_Zbtb3_2/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AACACGGCCA----
CAATCACTGGCAGAAT