| p-value: | 1e-15 |
| log p-value: | -3.528e+01 |
| Information Content per bp: | 1.456 |
| Number of Target Sequences with motif | 13.0 |
| Percentage of Target Sequences with motif | 0.19% |
| Number of Background Sequences with motif | 1.5 |
| Percentage of Background Sequences with motif | 0.01% |
| Average Position of motif in Targets | 403.5 +/- 375.9bp |
| Average Position of motif in Background | 782.8 +/- 420.2bp |
| Strand Bias (log2 ratio + to - strand density) | 0.7 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix)
reverse opposite |
| PDF Format Logos: | forward logo
reverse opposite |
HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson et al.)/Homer
| Match Rank: | 1 |
| Score: | 0.60
| | Offset: | 1
| | Orientation: | reverse strand |
| Alignment: | CRTGGTGTATGC-
-ATGATKGATGRC |
|
|
|
MA0594.1_Hoxa9/Jaspar
| Match Rank: | 2 |
| Score: | 0.58
| | Offset: | 2
| | Orientation: | reverse strand |
| Alignment: | CRTGGTGTATGC-
--TGATTTATGGC |
|
|
|
PB0208.1_Zscan4_2/Jaspar
| Match Rank: | 3 |
| Score: | 0.58
| | Offset: | 0
| | Orientation: | reverse strand |
| Alignment: | CRTGGTGTATGC----
NNNNTTGTGTGCTTNN |
|
|
|
PH0134.1_Pbx1/Jaspar
| Match Rank: | 4 |
| Score: | 0.57
| | Offset: | -5
| | Orientation: | reverse strand |
| Alignment: | -----CRTGGTGTATGC
NNNNNATTGATGNGTGN |
|
|
|
PB0130.1_Gm397_2/Jaspar
| Match Rank: | 5 |
| Score: | 0.56
| | Offset: | 0
| | Orientation: | reverse strand |
| Alignment: | CRTGGTGTATGC----
NNGCGTGTGTGCNGCN |
|
|
|
Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer
| Match Rank: | 6 |
| Score: | 0.55
| | Offset: | 2
| | Orientation: | reverse strand |
| Alignment: | CRTGGTGTATGC
--TGATTGATGA |
|
|
|
RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer
| Match Rank: | 7 |
| Score: | 0.55
| | Offset: | -3
| | Orientation: | reverse strand |
| Alignment: | ---CRTGGTGTATGC
NNHTGTGGTTWN--- |
|
|
|
Fox:Ebox(Forkhead:HLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer
| Match Rank: | 8 |
| Score: | 0.55
| | Offset: | 3
| | Orientation: | reverse strand |
| Alignment: | CRTGGTGTATGC--------
---NSTGTTTRCWCAGBNNN |
|
|
|
Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer
| Match Rank: | 9 |
| Score: | 0.55
| | Offset: | 2
| | Orientation: | reverse strand |
| Alignment: | CRTGGTGTATGC--
--TGATTTATGGCC |
|
|
|
RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer
| Match Rank: | 10 |
| Score: | 0.55
| | Offset: | -2
| | Orientation: | forward strand |
| Alignment: | --CRTGGTGTATGC
GCTGTGGTTT---- |
|
|
|
