Information for motif11


Reverse Opposite:

p-value:1e-10
log p-value:-2.517e+01
Information Content per bp:1.895
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif0.23%
Number of Background Sequences with motif4.7
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets474.7 +/- 371.0bp
Average Position of motif in Background732.4 +/- 591.7bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-ACCTTACCGA
NNACTTACCTN

PH0026.1_Duxbl/Jaspar

Match Rank:2
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--ACCTTACCGA-----
CGACCCAATCAACGGTG

PB0167.1_Sox13_2/Jaspar

Match Rank:3
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----ACCTTACCGA---
ANNTNCCCACCCANNAC

PB0055.1_Rfx4_1/Jaspar

Match Rank:4
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-ACCTTACCGA----
TACCATAGCAACGGT

PB0054.1_Rfx3_1/Jaspar

Match Rank:5
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----ACCTTACCGA--------
TGTGACCCTTAGCAACCGATTAA

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.52
Offset:0
Orientation:forward strand
Alignment:ACCTTACCGA
GCCACACCCA

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:7
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-ACCTTACCGA-
GGCCACACCCAN

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:8
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:ACCTTACCGA--
----AACCGANA

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:9
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--ACCTTACCGA
TGACCT------

MA0493.1_Klf1/Jaspar

Match Rank:10
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-ACCTTACCGA
GGCCACACCCA