Information for motif12


Reverse Opposite:

p-value:1e-10
log p-value:-2.470e+01
Information Content per bp:1.578
Number of Target Sequences with motif215.0
Percentage of Target Sequences with motif3.07%
Number of Background Sequences with motif343.7
Percentage of Background Sequences with motif1.89%
Average Position of motif in Targets374.1 +/- 309.7bp
Average Position of motif in Background411.9 +/- 381.6bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0081.1_Tcf1_1/Jaspar

Match Rank:1
Score:0.75
Offset:-5
Orientation:reverse strand
Alignment:-----AGTTAACTCA--
NNNTTAGTTAACTNANN

PH0167.1_Tcf1/Jaspar

Match Rank:2
Score:0.73
Offset:-5
Orientation:reverse strand
Alignment:-----AGTTAACTCA--
NTTTTAGTTAACNNAGN

PH0168.1_Hnf1b/Jaspar

Match Rank:3
Score:0.68
Offset:-6
Orientation:reverse strand
Alignment:------AGTTAACTCA-
ANNNCTAGTTAACNGNN

PH0079.1_Hoxd3/Jaspar

Match Rank:4
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----AGTTAACTCA-
ANGNTAATTANCNCAN

PH0045.1_Hoxa1/Jaspar

Match Rank:5
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----AGTTAACTCA-
ACGGTAATTAGCTCAG

PH0020.1_Dlx1/Jaspar

Match Rank:6
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---AGTTAACTCA-
ATTAATTANCTCAN

PH0174.1_Vax1/Jaspar

Match Rank:7
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----AGTTAACTCA-
ACGTTAATTAACCCAG

PH0090.1_Lbx2/Jaspar

Match Rank:8
Score:0.64
Offset:-7
Orientation:reverse strand
Alignment:-------AGTTAACTCA
TNNNATTAATTAANNCA

PH0009.1_Bsx/Jaspar

Match Rank:9
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----AGTTAACTCA-
CAGGTAATTACCTCAG

PB0031.1_Hoxa3_1/Jaspar

Match Rank:10
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---AGTTAACTCA-
GTTAATTANCTCNN