Information for motif18


Reverse Opposite:

p-value:1e-9
log p-value:-2.096e+01
Information Content per bp:1.824
Number of Target Sequences with motif166.0
Percentage of Target Sequences with motif2.37%
Number of Background Sequences with motif259.8
Percentage of Background Sequences with motif1.43%
Average Position of motif in Targets395.3 +/- 334.7bp
Average Position of motif in Background480.3 +/- 450.6bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0152.1_Pou6f1_2/Jaspar

Match Rank:1
Score:0.69
Offset:-5
Orientation:reverse strand
Alignment:-----GTCATTATGG--
GCAACCTCATTATNNNN

MA0089.1_NFE2L1::MafG/Jaspar

Match Rank:2
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:GTCATTATGG
GTCATN----

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:3
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GTCATTATGG
-YCATTAMC-

PH0151.1_Pou6f1_1/Jaspar

Match Rank:4
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----GTCATTATGG--
NNNACCTCATTATCNTN

PH0022.1_Dlx3/Jaspar

Match Rank:5
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----GTCATTATGG---
NNNGGTAATTATNGNGN

PH0023.1_Dlx4/Jaspar

Match Rank:6
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----GTCATTATGG---
GTCGGTAATTATNGNGN

PH0072.1_Hoxc8/Jaspar

Match Rank:7
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----GTCATTATGG-
TTGGGGTAATTAACGT

MA0095.2_YY1/Jaspar

Match Rank:8
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GTCATTATGG----
--CAAGATGGCGGC

PH0073.1_Hoxc9/Jaspar

Match Rank:9
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GTCATTATGG--
GGAGGTCATTAATTAT

PH0055.1_Hoxa7_2/Jaspar

Match Rank:10
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GTCATTATGG---
GTAGTAATTAATGGAA