Information for motif23


Reverse Opposite:

p-value:1e-8
log p-value:-1.856e+01
Information Content per bp:1.834
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.11%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets255.3 +/- 182.2bp
Average Position of motif in Background287.5 +/- 222.8bp
Strand Bias (log2 ratio + to - strand density)1.5
Multiplicity (# of sites on avg that occur together)1.88
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0595.1_SREBF1/Jaspar

Match Rank:1
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:TGTAGRGTGAAC
-GTGGGGTGAT-

Srebp2(HLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TGTAGRGTGAAC-
-GTGGCGTGACNG

Srebp1a(HLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TGTAGRGTGAAC
-ATGGGGTGAT-

MA0596.1_SREBF2/Jaspar

Match Rank:4
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TGTAGRGTGAAC
-ATGGGGTGAT-

MA0057.1_MZF1_5-13/Jaspar

Match Rank:5
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TGTAGRGTGAAC
-GGAGGGGGAA-

POL002.1_INR/Jaspar

Match Rank:6
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:TGTAGRGTGAAC
--NNNANTGA--

PB0181.1_Spdef_2/Jaspar

Match Rank:7
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--TGTAGRGTGAAC--
CTACTAGGATGTNNTN

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:8
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:TGTAGRGTGAAC---
---TATGTAAACANG

PB0161.1_Rxra_2/Jaspar

Match Rank:9
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---TGTAGRGTGAAC-
TCGCGAAGGTTGTACT

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:10
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:TGTAGRGTGAAC-
-GWAAYHTGABMC