| p-value: | 1e-6 |
| log p-value: | -1.558e+01 |
| Information Content per bp: | 1.813 |
| Number of Target Sequences with motif | 14.0 |
| Percentage of Target Sequences with motif | 0.20% |
| Number of Background Sequences with motif | 6.2 |
| Percentage of Background Sequences with motif | 0.03% |
| Average Position of motif in Targets | 569.4 +/- 351.6bp |
| Average Position of motif in Background | 919.5 +/- 612.3bp |
| Strand Bias (log2 ratio + to - strand density) | 2.1 |
| Multiplicity (# of sites on avg that occur together) | 2.29 |
| Motif File: | file (matrix)
reverse opposite |
| PDF Format Logos: | forward logo
reverse opposite |
HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson et al.)/Homer
| Match Rank: | 1 |
| Score: | 0.58
| | Offset: | 3
| | Orientation: | reverse strand |
| Alignment: | CTGSTGTTRGAT---
---ATGATKGATGRC |
|
|
|
MyoG(HLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer
| Match Rank: | 2 |
| Score: | 0.56
| | Offset: | 0
| | Orientation: | reverse strand |
| Alignment: | CTGSTGTTRGAT
CAGCTGTT---- |
|
|
|
Unknown-ESC-element/mES-Nanog-ChIP-Seq(GSE11724)/Homer
| Match Rank: | 3 |
| Score: | 0.56
| | Offset: | -4
| | Orientation: | reverse strand |
| Alignment: | ----CTGSTGTTRGAT
CCCCCTGCTGTG---- |
|
|
|
Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer
| Match Rank: | 4 |
| Score: | 0.56
| | Offset: | -1
| | Orientation: | reverse strand |
| Alignment: | -CTGSTGTTRGAT
ACAGCTGTTV--- |
|
|
|
SCL(HLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer
| Match Rank: | 5 |
| Score: | 0.55
| | Offset: | 0
| | Orientation: | reverse strand |
| Alignment: | CTGSTGTTRGAT
CAGCTGNT---- |
|
|
|
MA0133.1_BRCA1/Jaspar
| Match Rank: | 6 |
| Score: | 0.54
| | Offset: | 3
| | Orientation: | reverse strand |
| Alignment: | CTGSTGTTRGAT
---GTGTTGN-- |
|
|
|
MA0521.1_Tcf12/Jaspar
| Match Rank: | 7 |
| Score: | 0.54
| | Offset: | -3
| | Orientation: | reverse strand |
| Alignment: | ---CTGSTGTTRGAT
NNGCAGCTGTT---- |
|
|
|
PB0050.1_Osr1_1/Jaspar
| Match Rank: | 8 |
| Score: | 0.53
| | Offset: | -5
| | Orientation: | reverse strand |
| Alignment: | -----CTGSTGTTRGAT
TNNTGCTACTGTNNNN- |
|
|
|
Ptf1a(HLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer
| Match Rank: | 9 |
| Score: | 0.53
| | Offset: | -1
| | Orientation: | forward strand |
| Alignment: | -CTGSTGTTRGAT
ACAGCTGTTN--- |
|
|
|
PB0150.1_Mybl1_2/Jaspar
| Match Rank: | 10 |
| Score: | 0.52
| | Offset: | -2
| | Orientation: | reverse strand |
| Alignment: | --CTGSTGTTRGAT-
CACGGCAGTTGGTNN |
|
|
|
