Information for motif30


Reverse Opposite:

p-value:1e-6
log p-value:-1.413e+01
Information Content per bp:1.530
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif0.16%
Number of Background Sequences with motif4.6
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets401.7 +/- 242.9bp
Average Position of motif in Background999.1 +/- 901.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0036.1_Irf6_1/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-AGTCCGAAACCT----
CTGATCGAAACCAAAGT

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.67
Offset:2
Orientation:forward strand
Alignment:AGTCCGAAACCT
--ACTGAAACCA

PB0035.1_Irf5_1/Jaspar

Match Rank:3
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--AGTCCGAAACCT-
ATAAACCGAAACCAA

PB0034.1_Irf4_1/Jaspar

Match Rank:4
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-AGTCCGAAACCT--
CGTATCGAAACCAAA

PB0117.1_Eomes_2/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AGTCCGAAACCT----
NNGGCGACACCTCNNN

PB0033.1_Irf3_1/Jaspar

Match Rank:6
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AGTCCGAAACCT
GAGAACCGAAACTG

MA0513.1_SMAD2::SMAD3::SMAD4/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AGTCCGAAACCT
CTGTCTGTCACCT

Tbox:Smad/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:AGTCCGAAACCT
TGTCTGDCACCT

PB0037.1_Isgf3g_1/Jaspar

Match Rank:9
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--AGTCCGAAACCT-
CAAAATCGAAACTAA

PH0047.1_Hoxa11/Jaspar

Match Rank:10
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---AGTCCGAAACCT-
TAAAGTCGTAAAACAT