Information for motif33


Reverse Opposite:

p-value:1e-5
log p-value:-1.370e+01
Information Content per bp:1.461
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif0.29%
Number of Background Sequences with motif14.5
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets482.4 +/- 364.5bp
Average Position of motif in Background720.7 +/- 402.9bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0109.1_Bbx_2/Jaspar

Match Rank:1
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----GKGTTAACGA---
NNNNCTGTTAACNNTNN

PH0035.1_Gsc/Jaspar

Match Rank:2
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----GKGTTAACGA--
NNAAGGGATTAACGANT

PH0137.1_Pitx1/Jaspar

Match Rank:3
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------GKGTTAACGA-
TTAGAGGGATTAACAAT

MA0157.1_FOXO3/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GKGTTAACGA
-TGTAAACA-

MA0084.1_SRY/Jaspar

Match Rank:5
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GKGTTAACGA-
--GTAAACAAT

PB0018.1_Foxk1_1/Jaspar

Match Rank:6
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GKGTTAACGA----
AAAATGTAAACAAACAG

MA0480.1_Foxo1/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GKGTTAACGA--
-TGTAAACAGGA

PH0123.1_Obox3/Jaspar

Match Rank:8
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------GKGTTAACGA-
TGAGGGGGATTAACTAT

PH0168.1_Hnf1b/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GKGTTAACGA-----
AGCTGTTAACTAGCCGT

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GKGTTAACGA-
TATGTAAACANG