Information for motif38


Reverse Opposite:

p-value:1e-4
log p-value:-9.274e+00
Information Content per bp:1.391
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif0.17%
Number of Background Sequences with motif8.5
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets538.7 +/- 192.5bp
Average Position of motif in Background485.5 +/- 214.3bp
Strand Bias (log2 ratio + to - strand density)1.9
Multiplicity (# of sites on avg that occur together)1.58
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0001.1_ETS_class/Jaspar

Match Rank:1
Score:0.86
Offset:0
Orientation:reverse strand
Alignment:NTTCCGGTCN
CTTCCGGT--

PB0020.1_Gabpa_1/Jaspar

Match Rank:2
Score:0.82
Offset:-5
Orientation:reverse strand
Alignment:-----NTTCCGGTCN--
NNNNACTTCCGGTATNN

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.82
Offset:-2
Orientation:forward strand
Alignment:--NTTCCGGTCN
NRYTTCCGGY--

Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.82
Offset:-2
Orientation:forward strand
Alignment:--NTTCCGGTCN
HACTTCCGGY--

ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer

Match Rank:5
Score:0.81
Offset:-1
Orientation:reverse strand
Alignment:-NTTCCGGTCN
ACTTCCGGTT-

GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer

Match Rank:6
Score:0.80
Offset:-1
Orientation:reverse strand
Alignment:-NTTCCGGTCN
ACTTCCGGTN-

MA0076.2_ELK4/Jaspar

Match Rank:7
Score:0.79
Offset:-3
Orientation:forward strand
Alignment:---NTTCCGGTCN
CCACTTCCGGC--

MA0028.1_ELK1/Jaspar

Match Rank:8
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:NTTCCGGTCN
CTTCCGGNNN

ETS(ETS)/Promoter/Homer

Match Rank:9
Score:0.78
Offset:-1
Orientation:reverse strand
Alignment:-NTTCCGGTCN
ACTTCCGGTT-

ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.78
Offset:-1
Orientation:reverse strand
Alignment:-NTTCCGGTCN
ACTTCCGGNT-