Information for motif44


Reverse Opposite:

p-value:1e-3
log p-value:-7.346e+00
Information Content per bp:1.930
Number of Target Sequences with motif82.0
Percentage of Target Sequences with motif1.17%
Number of Background Sequences with motif145.6
Percentage of Background Sequences with motif0.80%
Average Position of motif in Targets543.8 +/- 462.0bp
Average Position of motif in Background551.6 +/- 382.4bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.66
Offset:2
Orientation:forward strand
Alignment:ATGAGCGT
--CAGCC-

PB0143.1_Klf7_2/Jaspar

Match Rank:2
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---ATGAGCGT------
NNNTNGGGCGTATNNTN

MA0006.1_Arnt::Ahr/Jaspar

Match Rank:3
Score:0.62
Offset:3
Orientation:forward strand
Alignment:ATGAGCGT-
---TGCGTG

MA0503.1_Nkx2-5_(var.2)/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-ATGAGCGT--
CTTGAGTGGCT

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:ATGAGCGT--
TTGAGTGSTT

PB0024.1_Gcm1_1/Jaspar

Match Rank:6
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----ATGAGCGT----
NNNNATGCGGGTNNNN

POL013.1_MED-1/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:ATGAGCGT
CGGAGC--

PH0151.1_Pou6f1_1/Jaspar

Match Rank:8
Score:0.57
Offset:-7
Orientation:forward strand
Alignment:-------ATGAGCGT--
GACGATAATGAGCTTGC

PH0152.1_Pou6f1_2/Jaspar

Match Rank:9
Score:0.56
Offset:-7
Orientation:forward strand
Alignment:-------ATGAGCGT--
AAACATAATGAGGTTGC

MA0089.1_NFE2L1::MafG/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-ATGAGCGT
CATGAC---