| p-value: | 1e-3 |
| log p-value: | -7.177e+00 |
| Information Content per bp: | 1.640 |
| Number of Target Sequences with motif | 1307.0 |
| Percentage of Target Sequences with motif | 18.63% |
| Number of Background Sequences with motif | 3119.9 |
| Percentage of Background Sequences with motif | 17.19% |
| Average Position of motif in Targets | 411.4 +/- 377.5bp |
| Average Position of motif in Background | 457.7 +/- 430.4bp |
| Strand Bias (log2 ratio + to - strand density) | -0.1 |
| Multiplicity (# of sites on avg that occur together) | 1.19 |
| Motif File: | file (matrix)
reverse opposite |
| PDF Format Logos: | forward logo
reverse opposite |
PB0132.1_Hbp1_2/Jaspar
| Match Rank: | 1 |
| Score: | 0.79
| | Offset: | -6
| | Orientation: | reverse strand |
| Alignment: | ------CAATWGGA---
NNTNNACAATGGGANNN |
|
|
|
MA0077.1_SOX9/Jaspar
| Match Rank: | 2 |
| Score: | 0.76
| | Offset: | -3
| | Orientation: | reverse strand |
| Alignment: | ---CAATWGGA
GAACAATGG-- |
|
|
|
NFY(CCAAT)/Promoter/Homer
| Match Rank: | 3 |
| Score: | 0.75
| | Offset: | -3
| | Orientation: | forward strand |
| Alignment: | ---CAATWGGA
AGCCAATCGG- |
|
|
|
MA0078.1_Sox17/Jaspar
| Match Rank: | 4 |
| Score: | 0.70
| | Offset: | -2
| | Orientation: | reverse strand |
| Alignment: | --CAATWGGA
GACAATGNN- |
|
|
|
PB0183.1_Sry_2/Jaspar
| Match Rank: | 5 |
| Score: | 0.69
| | Offset: | -8
| | Orientation: | forward strand |
| Alignment: | --------CAATWGGA-
TCACGGAACAATAGGTG |
|
|
|
Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer
| Match Rank: | 6 |
| Score: | 0.69
| | Offset: | -3
| | Orientation: | reverse strand |
| Alignment: | ---CAATWGGA
GAACAATGGN- |
|
|
|
PB0173.1_Sox21_2/Jaspar
| Match Rank: | 7 |
| Score: | 0.69
| | Offset: | -8
| | Orientation: | reverse strand |
| Alignment: | --------CAATWGGA-
NNNNNGAACAATTGANN |
|
|
|
PB0065.1_Sox15_1/Jaspar
| Match Rank: | 8 |
| Score: | 0.68
| | Offset: | -7
| | Orientation: | forward strand |
| Alignment: | -------CAATWGGA--
TAGTGAACAATAGATTT |
|
|
|
PB0070.1_Sox30_1/Jaspar
| Match Rank: | 9 |
| Score: | 0.68
| | Offset: | -6
| | Orientation: | forward strand |
| Alignment: | ------CAATWGGA--
AATGAACAATGGAATT |
|
|
|
PB0073.1_Sox7_1/Jaspar
| Match Rank: | 10 |
| Score: | 0.67
| | Offset: | -9
| | Orientation: | forward strand |
| Alignment: | ---------CAATWGGA-----
AATAAAGAACAATAGAATTTCA |
|
|
|
