Information for motif7


Reverse Opposite:

p-value:1e-12
log p-value:-2.890e+01
Information Content per bp:1.818
Number of Target Sequences with motif100.0
Percentage of Target Sequences with motif1.43%
Number of Background Sequences with motif114.4
Percentage of Background Sequences with motif0.63%
Average Position of motif in Targets436.0 +/- 445.4bp
Average Position of motif in Background562.5 +/- 473.2bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0081.1_SPIB/Jaspar

Match Rank:1
Score:0.65
Offset:5
Orientation:forward strand
Alignment:GAGAGTGAGGAA
-----AGAGGAA

MA0080.3_Spi1/Jaspar

Match Rank:2
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GAGAGTGAGGAA----
-AAAAAGAGGAAGTGA

MA0598.1_EHF/Jaspar

Match Rank:3
Score:0.62
Offset:6
Orientation:reverse strand
Alignment:GAGAGTGAGGAA--
------CAGGAAGG

MA0473.1_ELF1/Jaspar

Match Rank:4
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GAGAGTGAGGAA---
--GAACCAGGAAGTG

MA0098.2_Ets1/Jaspar

Match Rank:5
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GAGAGTGAGGAA-----
--NNNACAGGAAGTGGN

MA0474.1_Erg/Jaspar

Match Rank:6
Score:0.59
Offset:5
Orientation:forward strand
Alignment:GAGAGTGAGGAA----
-----ACAGGAAGTGG

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:7
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:GAGAGTGAGGAA--
----NACAGGAAAT

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:8
Score:0.57
Offset:5
Orientation:forward strand
Alignment:GAGAGTGAGGAA---
-----ACAGGAAGTG

MA0156.1_FEV/Jaspar

Match Rank:9
Score:0.57
Offset:6
Orientation:forward strand
Alignment:GAGAGTGAGGAA--
------CAGGAAAT

MA0136.1_ELF5/Jaspar

Match Rank:10
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:GAGAGTGAGGAA---
------AAGGAAGTA