Information for motif13


Reverse Opposite:

p-value:1e-11
log p-value:-2.557e+01
Information Content per bp:1.738
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif0.39%
Number of Background Sequences with motif6.8
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets368.7 +/- 388.2bp
Average Position of motif in Background499.7 +/- 372.0bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0092.1_Hand1::Tcfe2a/Jaspar

Match Rank:1
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CGTTTCTGGTAG
--GGTCTGGCAT

PB0032.1_IRC900814_1/Jaspar

Match Rank:2
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CGTTTCTGGTAG--
GNNATTTGTCGTAANN

PB0154.1_Osr1_2/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CGTTTCTGGTAG-----
-NNNTTAGGTAGCNTNT

PB0020.1_Gabpa_1/Jaspar

Match Rank:4
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CGTTTCTGGTAG--
NNNNACTTCCGGTATNN

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:5
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CGTTTCTGGTAG
-ATTTCCTGTN-

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CGTTTCTGGTAG
NRYTTCCGGY--

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CGTTTCTGGTAG
--TTCCNGGAAG

PB0155.1_Osr2_2/Jaspar

Match Rank:8
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CGTTTCTGGTAG-----
-NNTGTAGGTAGCANNT

PB0060.1_Smad3_1/Jaspar

Match Rank:9
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CGTTTCTGGTAG--
NNTNNTGTCTGGNNTNG

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:10
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CGTTTCTGGTAG-
-NNHTGTGGTTWN