Information for motif20


Reverse Opposite:

p-value:1e-6
log p-value:-1.467e+01
Information Content per bp:1.530
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif0.31%
Number of Background Sequences with motif14.8
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets349.7 +/- 387.0bp
Average Position of motif in Background395.0 +/- 475.3bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0045.1_Myb_1/Jaspar

Match Rank:1
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----AAACCCTTAT---
ATGGAAACCGTTATTTT

PB0046.1_Mybl1_1/Jaspar

Match Rank:2
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----AAACCCTTAT---
TTGAAAACCGTTAATTT

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:3
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:AAACCCTTAT---
---NCCTTATCTG

MA0109.1_Hltf/Jaspar

Match Rank:4
Score:0.64
Offset:2
Orientation:forward strand
Alignment:AAACCCTTAT--
--AACCTTATAT

PB0024.1_Gcm1_1/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--AAACCCTTAT----
TCGTACCCGCATCATT

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:6
Score:0.63
Offset:3
Orientation:forward strand
Alignment:AAACCCTTAT---
---NNCTTATCTN

PB0023.1_Gata6_1/Jaspar

Match Rank:7
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AAACCCTTAT-------
NNANTCTTATCTNNNNN

Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer

Match Rank:8
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:AAACCCTTAT----
----YCTTATCWVN

MA0482.1_Gata4/Jaspar

Match Rank:9
Score:0.60
Offset:4
Orientation:forward strand
Alignment:AAACCCTTAT-----
----TCTTATCTCCC

MA0035.3_Gata1/Jaspar

Match Rank:10
Score:0.59
Offset:3
Orientation:forward strand
Alignment:AAACCCTTAT----
---TTCTTATCTGT