Information for motif26


Reverse Opposite:

p-value:1e-5
log p-value:-1.222e+01
Information Content per bp:1.649
Number of Target Sequences with motif504.0
Percentage of Target Sequences with motif11.25%
Number of Background Sequences with motif2320.4
Percentage of Background Sequences with motif9.27%
Average Position of motif in Targets435.6 +/- 451.1bp
Average Position of motif in Background459.1 +/- 436.5bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0124.1_NKX3-1/Jaspar

Match Rank:1
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:ATAAGTAACT
-TAAGTAT--

MA0046.1_HNF1A/Jaspar

Match Rank:2
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----ATAAGTAACT
GNTAATNATTAACC

MA0109.1_Hltf/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--ATAAGTAACT
NNATAAGGNN--

PH0051.1_Hoxa4/Jaspar

Match Rank:4
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----ATAAGTAACT--
GATTATTAATTAACTTG

PH0143.1_Pou2f1/Jaspar

Match Rank:5
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----ATAAGTAACT-
ATATATTAATTAAGTA

MA0153.1_HNF1B/Jaspar

Match Rank:6
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---ATAAGTAACT
TTAATATTTAAC-

MA0135.1_Lhx3/Jaspar

Match Rank:7
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--ATAAGTAACT-
GATTAATTAATTT

MA0025.1_NFIL3/Jaspar

Match Rank:8
Score:0.62
Offset:0
Orientation:forward strand
Alignment:ATAAGTAACT-
TTATGTAACAT

PH0176.1_Vsx1/Jaspar

Match Rank:9
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----ATAAGTAACT--
ANTNATTAATTAACTNG

MA0036.2_GATA2/Jaspar

Match Rank:10
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----ATAAGTAACT
NCAGATAAGAANNN