Information for motif33


Reverse Opposite:

p-value:1e-2
log p-value:-6.081e+00
Information Content per bp:1.530
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.11%
Number of Background Sequences with motif5.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets708.4 +/- 315.0bp
Average Position of motif in Background574.5 +/- 366.7bp
Strand Bias (log2 ratio + to - strand density)1.7
Multiplicity (# of sites on avg that occur together)2.60
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0094.1_Zfp128_1/Jaspar

Match Rank:1
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----GCGCGTACCATG-
TCTTTGGCGTACCCTAA

PB0095.1_Zfp161_1/Jaspar

Match Rank:2
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------GCGCGTACCATG
NCANGCGCGCGCGCCA--

HIF2a(HLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:3
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GCGCGTACCATG
GCACGTACCC--

HIF-1a(HLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:4
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GCGCGTACCATG
BGCACGTA-----

PB0143.1_Klf7_2/Jaspar

Match Rank:5
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----GCGCGTACCATG
NNNTNGGGCGTATNNTN

PB0156.1_Plagl1_2/Jaspar

Match Rank:6
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----GCGCGTACCATG-
GCTGGGGGGTACCCCTT

MA0259.1_HIF1A::ARNT/Jaspar

Match Rank:7
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GCGCGTACCATG
GCACGTNC----

PB0027.1_Gmeb1_1/Jaspar

Match Rank:8
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----GCGCGTACCATG-
GAGTGTACGTAAGATGG

MA0032.1_FOXC1/Jaspar

Match Rank:9
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-GCGCGTACCATG
GGTAAGTA-----

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:GCGCGTACCATG
NNACTTACCTN-