Information for motif7


Reverse Opposite:

p-value:1e-10
log p-value:-2.378e+01
Information Content per bp:1.559
Number of Target Sequences with motif955.0
Percentage of Target Sequences with motif21.32%
Number of Background Sequences with motif4388.4
Percentage of Background Sequences with motif17.53%
Average Position of motif in Targets446.0 +/- 419.5bp
Average Position of motif in Background457.7 +/- 452.2bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.31
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

GATA-IR3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:1
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GAGAYHMAGTCT------
NDBAGATRWTATCTVNNNNN

PB0125.1_Gata3_2/Jaspar

Match Rank:2
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----GAGAYHMAGTCT------
NNNNNCGATANNATCTNNNNAN

MA0482.1_Gata4/Jaspar

Match Rank:3
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GAGAYHMAGTCT
NNGAGATAAGA---

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:4
Score:0.53
Offset:6
Orientation:forward strand
Alignment:GAGAYHMAGTCT--
------TWGTCTGV

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.53
Offset:6
Orientation:forward strand
Alignment:GAGAYHMAGTCT--
------CTGTCTGG

MA0037.2_GATA3/Jaspar

Match Rank:6
Score:0.52
Offset:1
Orientation:forward strand
Alignment:GAGAYHMAGTCT
-AGATAAGA---

PH0124.1_Obox5_1/Jaspar

Match Rank:7
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----GAGAYHMAGTCT-
TAGAGGGATTAAATTTC

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:8
Score:0.52
Offset:1
Orientation:forward strand
Alignment:GAGAYHMAGTCT
-AGATAASR---

PB0200.1_Zfp187_2/Jaspar

Match Rank:9
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---GAGAYHMAGTCT-
NNAGGGACAAGGGCNC

PB0140.1_Irf6_2/Jaspar

Match Rank:10
Score:0.51
Offset:-6
Orientation:reverse strand
Alignment:------GAGAYHMAGTCT
NNNACCGAGAGTNNN---