Information for motif2


Reverse Opposite:

p-value:1e-14
log p-value:-3.280e+01
Information Content per bp:1.506
Number of Target Sequences with motif803.0
Percentage of Target Sequences with motif17.92%
Number of Background Sequences with motif2429.5
Percentage of Background Sequences with motif13.79%
Average Position of motif in Targets455.3 +/- 422.7bp
Average Position of motif in Background475.0 +/- 447.5bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.43
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer

Match Rank:1
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CTGTAATCCCAG-
---AAACCACAGC

MA0092.1_Hand1::Tcfe2a/Jaspar

Match Rank:2
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:CTGTAATCCCAG---
-----ATGCCAGACN

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CTGTAATCCCAG
--NAAACCACAG

PB0169.1_Sox15_2/Jaspar

Match Rank:4
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CTGTAATCCCAG----
-TNGAATTTCATTNAN

MA0483.1_Gfi1b/Jaspar

Match Rank:5
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CTGTAATCCCAG--
---AAATCACAGCA

MA0019.1_Ddit3::Cebpa/Jaspar

Match Rank:6
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CTGTAATCCCAG
AGATGCAATCCC--

PB0129.1_Glis2_2/Jaspar

Match Rank:7
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CTGTAATCCCAG-
TCTTTANTAATANN

MA0002.2_RUNX1/Jaspar

Match Rank:8
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:CTGTAATCCCAG--
---AAACCACAGAN

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.53
Offset:7
Orientation:reverse strand
Alignment:CTGTAATCCCAG-
-------CACAGN

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:10
Score:0.53
Offset:3
Orientation:forward strand
Alignment:CTGTAATCCCAG-
---HTTTCCCASG