Information for motif12


Reverse Opposite:

p-value:1e-2
log p-value:-5.398e+00
Information Content per bp:1.907
Number of Target Sequences with motif59.0
Percentage of Target Sequences with motif1.32%
Number of Background Sequences with motif72.5
Percentage of Background Sequences with motif0.92%
Average Position of motif in Targets664.0 +/- 529.7bp
Average Position of motif in Background819.2 +/- 513.7bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0100.1_Zfp740_1/Jaspar

Match Rank:1
Score:0.77
Offset:-3
Orientation:reverse strand
Alignment:---GCGGGGGGGT---
NANNTGGGGGGGGNGN

PB0010.1_Egr1_1/Jaspar

Match Rank:2
Score:0.77
Offset:-3
Orientation:reverse strand
Alignment:---GCGGGGGGGT-
ANTGCGGGGGCGGN

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.76
Offset:2
Orientation:forward strand
Alignment:GCGGGGGGGT
--GGGGGGGG

PB0204.1_Zfp740_2/Jaspar

Match Rank:4
Score:0.73
Offset:-4
Orientation:reverse strand
Alignment:----GCGGGGGGGT---
ANTNCCGGGGGGAANTT

PB0103.1_Zic3_1/Jaspar

Match Rank:5
Score:0.73
Offset:-5
Orientation:forward strand
Alignment:-----GCGGGGGGGT
CCCCCCCGGGGGGGT

PB0025.1_Glis2_1/Jaspar

Match Rank:6
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-GCGGGGGGGT-----
NTNTGGGGGGTCNNNA

MA0162.2_EGR1/Jaspar

Match Rank:7
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-GCGGGGGGGT---
GGCGGGGGCGGGGG

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-GCGGGGGGGT
TGCGTGGGYG-

PB0097.1_Zfp281_1/Jaspar

Match Rank:9
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:GCGGGGGGGT-----
GGGGGGGGGGGGGGA

PB0102.1_Zic2_1/Jaspar

Match Rank:10
Score:0.72
Offset:-5
Orientation:forward strand
Alignment:-----GCGGGGGGGT
CCCCCCCGGGGGGGT