Information for motif1


Reverse Opposite:

p-value:1e-13
log p-value:-3.153e+01
Information Content per bp:1.488
Number of Target Sequences with motif807.0
Percentage of Target Sequences with motif14.91%
Number of Background Sequences with motif2044.8
Percentage of Background Sequences with motif11.50%
Average Position of motif in Targets404.3 +/- 399.4bp
Average Position of motif in Background466.9 +/- 439.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.37
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0019.1_Ddit3::Cebpa/Jaspar

Match Rank:1
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---TSTMATCYHARY
AGATGCAATCCC---

PB0169.1_Sox15_2/Jaspar

Match Rank:2
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----TSTMATCYHARY
TTGAATGAAATTCGA--

PB0174.1_Sox30_2/Jaspar

Match Rank:3
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------TSTMATCYHARY
NCGTATTATAATCNTA--

MA0151.1_ARID3A/Jaspar

Match Rank:4
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TSTMATCYHARY
TTTAAT------

PB0021.1_Gata3_1/Jaspar

Match Rank:5
Score:0.56
Offset:-7
Orientation:reverse strand
Alignment:-------TSTMATCYHARY---
NNTNANTTCTTATCTCTANANN

GATA-IR3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:6
Score:0.56
Offset:-6
Orientation:reverse strand
Alignment:------TSTMATCYHARY--
NDBAGATRWTATCTVNNNNN

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:7
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TSTMATCYHARY
YSTTATCT----

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:8
Score:0.55
Offset:2
Orientation:forward strand
Alignment:TSTMATCYHARY
--TAATCCCN--

MA0036.2_GATA2/Jaspar

Match Rank:9
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----TSTMATCYHARY
AGATTCTTATCTGT--

PB0185.1_Tcf1_2/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TSTMATCYHARY--
NNTAATCCNGNCNN