Information for motif14


Reverse Opposite:

p-value:1e-3
log p-value:-9.001e+00
Information Content per bp:1.530
Number of Target Sequences with motif501.0
Percentage of Target Sequences with motif9.26%
Number of Background Sequences with motif1400.2
Percentage of Background Sequences with motif7.88%
Average Position of motif in Targets380.4 +/- 395.8bp
Average Position of motif in Background463.3 +/- 422.6bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0158.1_HOXA5/Jaspar

Match Rank:1
Score:0.71
Offset:1
Orientation:forward strand
Alignment:CCTGTAAT-
-CACTAATT

PH0158.1_Rhox11_2/Jaspar

Match Rank:2
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----CCTGTAAT----
AGGACGCTGTAAAGGGA

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:3
Score:0.66
Offset:2
Orientation:forward strand
Alignment:CCTGTAAT--
--GKTAATGR

PH0157.1_Rhox11_1/Jaspar

Match Rank:4
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----CCTGTAAT----
AAGACGCTGTAAAGCGA

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CCTGTAAT
GCTGTG--

MA0075.1_Prrx2/Jaspar

Match Rank:6
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:CCTGTAAT-
----TAATT

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CCTGTAAT--
NCTGGAATGC

MA0132.1_Pdx1/Jaspar

Match Rank:8
Score:0.64
Offset:3
Orientation:forward strand
Alignment:CCTGTAAT-
---CTAATT

PH0084.1_Irx3_2/Jaspar

Match Rank:9
Score:0.64
Offset:-6
Orientation:forward strand
Alignment:------CCTGTAAT---
AATATACATGTAATATA

PH0141.1_Pknox2/Jaspar

Match Rank:10
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----CCTGTAAT---
AAGCACCTGTCAATAT