Information for motif15


Reverse Opposite:

p-value:1e-3
log p-value:-7.724e+00
Information Content per bp:1.776
Number of Target Sequences with motif422.0
Percentage of Target Sequences with motif7.80%
Number of Background Sequences with motif1180.4
Percentage of Background Sequences with motif6.64%
Average Position of motif in Targets353.7 +/- 342.9bp
Average Position of motif in Background434.7 +/- 393.8bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:1
Score:0.82
Offset:-2
Orientation:forward strand
Alignment:--CTAAAAAAAA--
TACTGGAAAAAAAA

PB0116.1_Elf3_2/Jaspar

Match Rank:2
Score:0.78
Offset:-3
Orientation:forward strand
Alignment:---CTAAAAAAAA----
GTTCAAAAAAAAAATTC

PB0182.1_Srf_2/Jaspar

Match Rank:3
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-CTAAAAAAAA------
GTTAAAAAAAAAAATTA

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:4
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-CTAAAAAAAA
NCYAATAAAA-

PH0057.1_Hoxb13/Jaspar

Match Rank:5
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---CTAAAAAAAA---
AACCCAATAAAATTCG

PH0078.1_Hoxd13/Jaspar

Match Rank:6
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---CTAAAAAAAA---
CTACCAATAAAATTCT

PB0186.1_Tcf3_2/Jaspar

Match Rank:7
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---CTAAAAAAAA--
AGCCGAAAAAAAAAT

PH0068.1_Hoxc13/Jaspar

Match Rank:8
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----CTAAAAAAAA--
AAAGCTCGTAAAATTT

PB0148.1_Mtf1_2/Jaspar

Match Rank:9
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--CTAAAAAAAA--
AAATAAGAAAAAAC

PH0048.1_Hoxa13/Jaspar

Match Rank:10
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----CTAAAAAAAA--
AAACCTCGTAAAATTT