Information for motif20


Reverse Opposite:

p-value:1e-1
log p-value:-4.261e+00
Information Content per bp:1.974
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.07%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets376.6 +/- 201.4bp
Average Position of motif in Background510.9 +/- 234.2bp
Strand Bias (log2 ratio + to - strand density)2.9
Multiplicity (# of sites on avg that occur together)4.25
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0137.1_Irf3_2/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:forward strand
Alignment:ACAGAGAGGTGC--
GGAGAAAGGTGCGA

PB0140.1_Irf6_2/Jaspar

Match Rank:2
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---ACAGAGAGGTGC
NNNACCGAGAGTNNN

PB0139.1_Irf5_2/Jaspar

Match Rank:3
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---ACAGAGAGGTGC
TTGACCGAGAATTCC

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.56
Offset:6
Orientation:forward strand
Alignment:ACAGAGAGGTGC--
------AGGTGTCA

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:5
Score:0.56
Offset:0
Orientation:forward strand
Alignment:ACAGAGAGGTGC-----
ATCCACAGGTGCGAAAA

PB0117.1_Eomes_2/Jaspar

Match Rank:6
Score:0.54
Offset:2
Orientation:forward strand
Alignment:ACAGAGAGGTGC------
--GCGGAGGTGTCGCCTC

E2A-nearPU.1(HLH)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:ACAGAGAGGTGC-
---NNCAGGTGNN

MA0499.1_Myod1/Jaspar

Match Rank:8
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:ACAGAGAGGTGC-
NGNGACAGCTGCN

MA0442.1_SOX10/Jaspar

Match Rank:9
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:ACAGAGAGGTGC
ACAAAG------

PB0138.1_Irf4_2/Jaspar

Match Rank:10
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---ACAGAGAGGTGC
GNNACCGAGAATNNN