Information for motif24


Reverse Opposite:

p-value:1e0
log p-value:-1.888e+00
Information Content per bp:1.530
Number of Target Sequences with motif58.0
Percentage of Target Sequences with motif1.07%
Number of Background Sequences with motif165.2
Percentage of Background Sequences with motif0.93%
Average Position of motif in Targets334.1 +/- 229.1bp
Average Position of motif in Background472.7 +/- 413.8bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0029.1_Mecom/Jaspar

Match Rank:1
Score:0.76
Offset:0
Orientation:forward strand
Alignment:AAGAAAAGAAAA--
AAGATAAGATAACA

T1ISRE(IRF)/Ifnb-Exp/Homer

Match Rank:2
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:AAGAAAAGAAAA-
-AGAAACGAAAGT

MA0481.1_FOXP1/Jaspar

Match Rank:3
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---AAGAAAAGAAAA
CAAAAGTAAACAAAG

PB0148.1_Mtf1_2/Jaspar

Match Rank:4
Score:0.64
Offset:1
Orientation:forward strand
Alignment:AAGAAAAGAAAA---
-AAATAAGAAAAAAC

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AAGAAAAGAAAA
CGGAAGTGAAAC

MA0037.2_GATA3/Jaspar

Match Rank:6
Score:0.64
Offset:1
Orientation:forward strand
Alignment:AAGAAAAGAAAA
-AGATAAGA---

MA0035.3_Gata1/Jaspar

Match Rank:7
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-AAGAAAAGAAAA
ANAGATAAGAA--

PB0182.1_Srf_2/Jaspar

Match Rank:8
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--AAGAAAAGAAAA---
GTTAAAAAAAAAAATTA

PB0015.1_Foxa2_1/Jaspar

Match Rank:9
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---AAGAAAAGAAAA--
AAAAAGTAAACAAAGAC

PB0021.1_Gata3_1/Jaspar

Match Rank:10
Score:0.63
Offset:-6
Orientation:forward strand
Alignment:------AAGAAAAGAAAA----
TTTTTAGAGATAAGAAATAAAG