Information for motif26


Reverse Opposite:

p-value:1e0
log p-value:-1.515e+00
Information Content per bp:1.731
Number of Target Sequences with motif141.0
Percentage of Target Sequences with motif2.61%
Number of Background Sequences with motif434.0
Percentage of Background Sequences with motif2.44%
Average Position of motif in Targets716.0 +/- 568.2bp
Average Position of motif in Background810.2 +/- 429.3bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.24
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0009.1_E2F3_1/Jaspar

Match Rank:1
Score:0.78
Offset:-4
Orientation:forward strand
Alignment:----SGGCGCKC---
ATAAGGGCGCGCGAT

PB0008.1_E2F2_1/Jaspar

Match Rank:2
Score:0.77
Offset:-4
Orientation:forward strand
Alignment:----SGGCGCKC---
ATAAAGGCGCGCGAT

POL006.1_BREu/Jaspar

Match Rank:3
Score:0.77
Offset:1
Orientation:reverse strand
Alignment:SGGCGCKC-
-GGCGCGCT

PB0095.1_Zfp161_1/Jaspar

Match Rank:4
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--SGGCGCKC------
TGGCGCGCGCGCCTGA

PB0052.1_Plagl1_1/Jaspar

Match Rank:5
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----SGGCGCKC----
TTGGGGGCGCCCCTAG

PB0199.1_Zfp161_2/Jaspar

Match Rank:6
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----SGGCGCKC-
NNGCNCTGCGCGGC

MA0597.1_THAP1/Jaspar

Match Rank:7
Score:0.63
Offset:0
Orientation:forward strand
Alignment:SGGCGCKC-
CTGCCCGCA

MA0006.1_Arnt::Ahr/Jaspar

Match Rank:8
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:SGGCGCKC-
---CACGCA

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo et al.)/Homer

Match Rank:9
Score:0.58
Offset:0
Orientation:forward strand
Alignment:SGGCGCKC--
TBGCACGCAA

PB0133.1_Hic1_2/Jaspar

Match Rank:10
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------SGGCGCKC--
NNNNTTGGGCACNNCN