Information for motif28


Reverse Opposite:

p-value:1e0
log p-value:-2.680e-01
Information Content per bp:1.882
Number of Target Sequences with motif674.0
Percentage of Target Sequences with motif12.46%
Number of Background Sequences with motif2271.4
Percentage of Background Sequences with motif12.78%
Average Position of motif in Targets394.0 +/- 365.1bp
Average Position of motif in Background472.8 +/- 414.7bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.79
Offset:-1
Orientation:forward strand
Alignment:-AAGGAATS-
NCTGGAATGC

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:2
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-AAGGAATS-
CCWGGAATGY

MA0090.1_TEAD1/Jaspar

Match Rank:3
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--AAGGAATS--
CNGAGGAATGTG

MA0136.1_ELF5/Jaspar

Match Rank:4
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:AAGGAATS-
AAGGAAGTA

PB0203.1_Zfp691_2/Jaspar

Match Rank:5
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----AAGGAATS-----
NTNNNAGGAGTCTCNTN

MA0081.1_SPIB/Jaspar

Match Rank:6
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-AAGGAATS
AGAGGAA--

PB0028.1_Hbp1_1/Jaspar

Match Rank:7
Score:0.63
Offset:-6
Orientation:forward strand
Alignment:------AAGGAATS--
ACTATGAATGAATGAT

MA0109.1_Hltf/Jaspar

Match Rank:8
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----AAGGAATS
NNATAAGGNN--

PB0166.1_Sox12_2/Jaspar

Match Rank:9
Score:0.61
Offset:-9
Orientation:forward strand
Alignment:---------AAGGAATS
AAACAGACAAAGGAAT-

MA0598.1_EHF/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AAGGAATS
CAGGAAGG