Information for motif4


Reverse Opposite:

p-value:1e-7
log p-value:-1.643e+01
Information Content per bp:1.684
Number of Target Sequences with motif217.0
Percentage of Target Sequences with motif4.01%
Number of Background Sequences with motif490.2
Percentage of Background Sequences with motif2.76%
Average Position of motif in Targets394.8 +/- 366.1bp
Average Position of motif in Background479.8 +/- 434.0bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0156.1_FEV/Jaspar

Match Rank:1
Score:0.71
Offset:1
Orientation:forward strand
Alignment:CCAGGAGTTVGA
-CAGGAAAT---

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:2
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-CCAGGAGTTVGA
ANCAGGATGT---

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CCAGGAGTTVGA
NCTGGAATGC--

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:4
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CCAGGAGTTVGA
NACAGGAAAT---

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:5
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CCAGGAGTTVGA
ACAGGAAGTG--

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:6
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CCAGGAGTTVGA
NACAGGAAAT---

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer

Match Rank:7
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CCAGGAGTTVGA
AACAGGAAGT---

MA0136.1_ELF5/Jaspar

Match Rank:8
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CCAGGAGTTVGA
-AAGGAAGTA--

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:9
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CCAGGAGTTVGA
ACAGGAAGTG--

MA0098.2_Ets1/Jaspar

Match Rank:10
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CCAGGAGTTVGA
NNNACAGGAAGTGGN