Information for motif12


Reverse Opposite:

p-value:1e0
log p-value:-9.832e-01
Information Content per bp:1.786
Number of Target Sequences with motif310.0
Percentage of Target Sequences with motif5.74%
Number of Background Sequences with motif453.2
Percentage of Background Sequences with motif5.63%
Average Position of motif in Targets328.3 +/- 327.5bp
Average Position of motif in Background511.6 +/- 447.2bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0180.1_Sp4_2/Jaspar

Match Rank:1
Score:0.73
Offset:-4
Orientation:reverse strand
Alignment:----WCACGCCTGT-
NNGGCCACGCCTTTN

MA0103.2_ZEB1/Jaspar

Match Rank:2
Score:0.65
Offset:0
Orientation:forward strand
Alignment:WCACGCCTGT
CCTCACCTG-

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.64
Offset:5
Orientation:forward strand
Alignment:WCACGCCTGT-
-----GCTGTG

MA0006.1_Arnt::Ahr/Jaspar

Match Rank:4
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:WCACGCCTGT
-CACGCA---

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--WCACGCCTGT
NNACTTGCCTT-

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:6
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---WCACGCCTGT----
NNTNCGCACCTGTNGAN

E2A-nearPU.1(HLH)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:WCACGCCTGT-
-NNCACCTGNN

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:WCACGCCTGT
CNAGGCCT--

PB0151.1_Myf6_2/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-WCACGCCTGT----
GGNGCGNCTGTTNNN

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-WCACGCCTGT
TTCCCGCCWG-