Information for motif6


Reverse Opposite:

p-value:1e-2
log p-value:-5.219e+00
Information Content per bp:1.651
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif0.46%
Number of Background Sequences with motif21.5
Percentage of Background Sequences with motif0.27%
Average Position of motif in Targets824.0 +/- 509.4bp
Average Position of motif in Background783.1 +/- 375.1bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0052.1_Plagl1_1/Jaspar

Match Rank:1
Score:0.78
Offset:-4
Orientation:reverse strand
Alignment:----CGGCGCCCCC--
NNNGGGGCGCCCCCNN

PB0076.1_Sp4_1/Jaspar

Match Rank:2
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--CGGCGCCCCC-----
GGTCCCGCCCCCTTCTC

PB0010.1_Egr1_1/Jaspar

Match Rank:3
Score:0.70
Offset:1
Orientation:forward strand
Alignment:CGGCGCCCCC-----
-TCCGCCCCCGCATT

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---CGGCGCCCCC-------
CNNBRGCGCCCCCTGSTGGC

MA0162.2_EGR1/Jaspar

Match Rank:5
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-CGGCGCCCCC---
CCCCCGCCCCCGCC

MA0155.1_INSM1/Jaspar

Match Rank:6
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:CGGCGCCCCC-----
---CGCCCCCTGACA

PB0113.1_E2F3_2/Jaspar

Match Rank:7
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----CGGCGCCCCC---
AGCTCGGCGCCAAAAGC

Sp1(Zf)/Promoter/Homer

Match Rank:8
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CGGCGCCCCC
GGCCCCGCCCCC

PB0112.1_E2F2_2/Jaspar

Match Rank:9
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----CGGCGCCCCC---
CCTTCGGCGCCAAAAGG

PB0100.1_Zfp740_1/Jaspar

Match Rank:10
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CGGCGCCCCC------
CCCCCCCCCCCACTTG