Information for motif2


Reverse Opposite:

p-value:1e-8
log p-value:-2.034e+01
Information Content per bp:1.635
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif63.64%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif17.86%
Average Position of motif in Targets177.3 +/- 110.3bp
Average Position of motif in Background519.6 +/- 162.3bp
Strand Bias (log2 ratio + to - strand density)1.5
Multiplicity (# of sites on avg that occur together)1.36
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0152.1_NFATC2/Jaspar

Match Rank:1
Score:0.86
Offset:2
Orientation:forward strand
Alignment:TCTTTTCC-
--TTTTCCA

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer

Match Rank:2
Score:0.73
Offset:1
Orientation:forward strand
Alignment:TCTTTTCC---
-ATTTTCCATT

Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer

Match Rank:3
Score:0.72
Offset:1
Orientation:forward strand
Alignment:TCTTTTCC---
-NRYTTCCGGH

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---TCTTTTCC-
GTTTCACTTCCG

PB0012.1_Elf3_1/Jaspar

Match Rank:5
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:TCTTTTCC-----
TTACTTCCTNGTN

MA0081.1_SPIB/Jaspar

Match Rank:6
Score:0.69
Offset:4
Orientation:reverse strand
Alignment:TCTTTTCC---
----TTCCTCT

MA0028.1_ELK1/Jaspar

Match Rank:7
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:TCTTTTCC-----
---CTTCCGGNNN

MA0136.1_ELF5/Jaspar

Match Rank:8
Score:0.67
Offset:1
Orientation:forward strand
Alignment:TCTTTTCC--
-TACTTCCTT

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.67
Offset:1
Orientation:forward strand
Alignment:TCTTTTCC---
-NRYTTCCGGY

Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.66
Offset:1
Orientation:forward strand
Alignment:TCTTTTCC---
-HACTTCCGGY