Information for motif4


Reverse Opposite:

p-value:1e-3
log p-value:-9.134e+00
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif6.61%
Average Position of motif in Targets308.0 +/- 346.1bp
Average Position of motif in Background589.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0006.1_Arnt::Ahr/Jaspar

Match Rank:1
Score:0.78
Offset:3
Orientation:reverse strand
Alignment:GCTCACGC-
---CACGCA

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo et al.)/Homer

Match Rank:2
Score:0.70
Offset:0
Orientation:forward strand
Alignment:GCTCACGC--
TBGCACGCAA

MA0117.1_Mafb/Jaspar

Match Rank:3
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GCTCACGC
GCTGACGC

MA0024.2_E2F1/Jaspar

Match Rank:4
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:GCTCACGC---
CCTCCCGCCCN

Egr2/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:5
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---GCTCACGC-
YCCGCCCACGCN

PB0044.1_Mtf1_1/Jaspar

Match Rank:6
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----GCTCACGC---
NNTTTGCACACGGCCC

POL011.1_XCPE1/Jaspar

Match Rank:7
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GCTCACGC--
GGTCCCGCCC

MA0506.1_NRF1/Jaspar

Match Rank:8
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GCTCACGC--
TGCGCAGGCGC

MA0469.1_E2F3/Jaspar

Match Rank:9
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GCTCACGC--------
-CTCCCGCCCCCACTC

Srebp2(HLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GCTCACGC---
CNGTCACGCCAC