Information for motif8


Reverse Opposite:

p-value:1e-2
log p-value:-5.023e+00
Information Content per bp:1.530
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif66.67%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif6.54%
Average Position of motif in Targets505.8 +/- 214.5bp
Average Position of motif in Background820.8 +/- 230.3bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)3.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0194.1_Zbtb12_2/Jaspar

Match Rank:1
Score:0.85
Offset:-4
Orientation:reverse strand
Alignment:----TTCTAATG---
AGNGTTCTAATGANN

MA0132.1_Pdx1/Jaspar

Match Rank:2
Score:0.76
Offset:2
Orientation:forward strand
Alignment:TTCTAATG
--CTAATT

PB0079.1_Sry_1/Jaspar

Match Rank:3
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----TTCTAATG---
TATAATTATAATATTC

PB0187.1_Tcf7_2/Jaspar

Match Rank:4
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----TTCTAATG---
NNNTTTNTAATACNG

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:5
Score:0.68
Offset:2
Orientation:forward strand
Alignment:TTCTAATG--
--CTAATKGV

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:6
Score:0.67
Offset:1
Orientation:forward strand
Alignment:TTCTAATG-
-GKTAATGR

PB0174.1_Sox30_2/Jaspar

Match Rank:7
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----TTCTAATG---
NCGTATTATAATCNTA

MA0142.1_Pou5f1::Sox2/Jaspar

Match Rank:8
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TTCTAATG-----
CTTTGTTATGCAAAT

PB0069.1_Sox21_1/Jaspar

Match Rank:9
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----TTCTAATG---
NNTAATTATAATNANN

PB0064.1_Sox14_1/Jaspar

Match Rank:10
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----TTCTAATG---
GCTAATTATAATTATC