Information for motif1


Reverse Opposite:

p-value:1e-2
log p-value:-6.372e+00
Information Content per bp:1.530
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif92.31%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif100.00%
Average Position of motif in Targets243.6 +/- 228.4bp
Average Position of motif in Background520.2 +/- 200.6bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)7.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0016.1_Foxj1_1/Jaspar

Match Rank:1
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--TATGTGTTTA----
NNNNTTTGTTTACNNT

MA0593.1_FOXP2/Jaspar

Match Rank:2
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:TATGTGTTTA---
--TNTGTTTACTT

FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer

Match Rank:3
Score:0.73
Offset:1
Orientation:forward strand
Alignment:TATGTGTTTA---
-NYYTGTTTACHN

MA0481.1_FOXP1/Jaspar

Match Rank:4
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:TATGTGTTTA------
-CTTTGTTTACTTTTN

MF0005.1_Forkhead_class/Jaspar

Match Rank:5
Score:0.71
Offset:4
Orientation:forward strand
Alignment:TATGTGTTTA---
----TGTTTATTT

MA0157.1_FOXO3/Jaspar

Match Rank:6
Score:0.70
Offset:4
Orientation:reverse strand
Alignment:TATGTGTTTA--
----TGTTTACA

MA0031.1_FOXD1/Jaspar

Match Rank:7
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:TATGTGTTTA-
---ATGTTTAC

PB0017.1_Foxj3_1/Jaspar

Match Rank:8
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TATGTGTTTA------
NNNTTTGTTTACNTTNN

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan et al.)/Homer

Match Rank:9
Score:0.68
Offset:3
Orientation:forward strand
Alignment:TATGTGTTTA-
---CTGTTTAC

MA0030.1_FOXF2/Jaspar

Match Rank:10
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:TATGTGTTTA------
--NTTGTTTACGTTNN