Information for motif2


Reverse Opposite:

p-value:1e-2
log p-value:-6.372e+00
Information Content per bp:1.530
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif92.31%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif100.00%
Average Position of motif in Targets386.3 +/- 296.8bp
Average Position of motif in Background575.4 +/- 190.9bp
Strand Bias (log2 ratio + to - strand density)2.7
Multiplicity (# of sites on avg that occur together)2.58
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0182.1_Srf_2/Jaspar

Match Rank:1
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:TAATTTTTTTTT-----
NNNNTTTTTTTTTNAAC

PB0116.1_Elf3_2/Jaspar

Match Rank:2
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:TAATTTTTTTTT-----
GNATTTTTTTTTTGANC

PH0006.1_Barhl2/Jaspar

Match Rank:3
Score:0.73
Offset:-4
Orientation:reverse strand
Alignment:----TAATTTTTTTTT
NNNTTAATTGGTTTTT

PB0093.1_Zfp105_1/Jaspar

Match Rank:4
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:TAATTTTTTTTT---
NTNTTGTTGTTTGTN

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:5
Score:0.71
Offset:3
Orientation:reverse strand
Alignment:TAATTTTTTTTT-----
---TTTTTTTTCNNGTN

PB0186.1_Tcf3_2/Jaspar

Match Rank:6
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:TAATTTTTTTTT-----
--NNTTTNTTTTNGNNN

MA0041.1_Foxd3/Jaspar

Match Rank:7
Score:0.70
Offset:0
Orientation:forward strand
Alignment:TAATTTTTTTTT
GAATGTTTGTTT

PH0005.1_Barhl1/Jaspar

Match Rank:8
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----TAATTTTTTTTT
GNNTTAATTGGTTGTT

PH0108.1_Msx3/Jaspar

Match Rank:9
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----TAATTTTTTTTT
NNNTTAATTGGTTTTN

MA0075.1_Prrx2/Jaspar

Match Rank:10
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TAATTTTTTTTT
TAATT-------