Information for motif6


Reverse Opposite:

p-value:1e0
log p-value:-2.014e+00
Information Content per bp:1.530
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif69.23%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif34.78%
Average Position of motif in Targets344.9 +/- 273.1bp
Average Position of motif in Background752.5 +/- 74.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)2.25
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.73
Offset:0
Orientation:forward strand
Alignment:GAAGGAATTT
NCTGGAATGC

MA0136.1_ELF5/Jaspar

Match Rank:2
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:GAAGGAATTT
-AAGGAAGTA

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:3
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GAAGGAATTT
CCWGGAATGY

MA0156.1_FEV/Jaspar

Match Rank:4
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GAAGGAATTT
-CAGGAAAT-

NFkB-p65-Rel(RHD)/LPS-exp(GSE23622)/Homer

Match Rank:5
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:GAAGGAATTT--
--GGGAATTTCC

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:6
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GAAGGAATTT
NACAGGAAAT-

MA0090.1_TEAD1/Jaspar

Match Rank:7
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GAAGGAATTT-
CNGAGGAATGTG

EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer

Match Rank:8
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GAAGGAATTT
AVCAGGAAGT-

PB0028.1_Hbp1_1/Jaspar

Match Rank:9
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----GAAGGAATTT-
ACTATGAATGAATGAT

PB0012.1_Elf3_1/Jaspar

Match Rank:10
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GAAGGAATTT-
AACAAGGAAGTAA