Information for motif8


Reverse Opposite:

p-value:1e0
log p-value:-1.236e+00
Information Content per bp:1.530
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif61.54%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif100.00%
Average Position of motif in Targets387.0 +/- 291.9bp
Average Position of motif in Background439.0 +/- 298.5bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)2.43
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.68
Offset:2
Orientation:forward strand
Alignment:GTGCTGTGAG
--GCTGTG--

PB0205.1_Zic1_2/Jaspar

Match Rank:2
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----GTGCTGTGAG-
TNTCCTGCTGTGNNG

Srebp2(HLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GTGCTGTGAG--
GTGGCGTGACNG

MA0595.1_SREBF1/Jaspar

Match Rank:4
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GTGCTGTGAG
GTGGGGTGAT

PB0206.1_Zic2_2/Jaspar

Match Rank:5
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----GTGCTGTGAG-
TCNCCTGCTGNGNNN

PB0207.1_Zic3_2/Jaspar

Match Rank:6
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----GTGCTGTGAG-
NNTCCTGCTGTGNNN

Srebp1a(HLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GTGCTGTGAG
ATGGGGTGAT

PB0091.1_Zbtb3_1/Jaspar

Match Rank:8
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----GTGCTGTGAG---
NNNANTGCAGTGCNNTT

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:9
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GTGCTGTGAG-
GGTGYTGACAGS

Unknown-ESC-element/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----GTGCTGTGAG
CCCCCTGCTGTG--