Information for motif9


Reverse Opposite:

p-value:1e0
log p-value:-1.236e+00
Information Content per bp:1.530
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif61.54%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif55.81%
Average Position of motif in Targets431.9 +/- 335.4bp
Average Position of motif in Background531.0 +/- 253.7bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)2.50
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ETS:RUNX/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:1
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CCAGGCTGAGGT
ACAGGATGTGGT

MA0117.1_Mafb/Jaspar

Match Rank:2
Score:0.60
Offset:4
Orientation:forward strand
Alignment:CCAGGCTGAGGT
----GCTGACGC

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer

Match Rank:3
Score:0.60
Offset:4
Orientation:forward strand
Alignment:CCAGGCTGAGGT--
----GCTGTGGTTT

MA0146.2_Zfx/Jaspar

Match Rank:4
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CCAGGCTGAGGT---
-CAGGCCNNGGCCNN

Unknown-ESC-element/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CCAGGCTGAGGT
CCCCCTGCTGTG--

MA0002.2_RUNX1/Jaspar

Match Rank:6
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CCAGGCTGAGGT--
---GTCTGTGGTTT

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:7
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:CCAGGCTGAGGT---
-----CTGTGGTTTN

MA0483.1_Gfi1b/Jaspar

Match Rank:8
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CCAGGCTGAGGT--
---TGCTGTGATTT

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:9
Score:0.55
Offset:6
Orientation:forward strand
Alignment:CCAGGCTGAGGT
------TGACGT

PB0206.1_Zic2_2/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CCAGGCTGAGGT-
TCNCCTGCTGNGNNN