Information for motif13


Reverse Opposite:

p-value:1e-10
log p-value:-2.384e+01
Information Content per bp:1.846
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif3.00%
Number of Background Sequences with motif17.6
Percentage of Background Sequences with motif0.71%
Average Position of motif in Targets408.9 +/- 290.5bp
Average Position of motif in Background501.6 +/- 339.2bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0121.1_Foxj3_2/Jaspar

Match Rank:1
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---TCCATAACAT----
AACACCAAAACAAAGGA

PB0122.1_Foxk1_2/Jaspar

Match Rank:2
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---TCCATAACAT--
CAAACAACAACACCT

PB0090.1_Zbtb12_1/Jaspar

Match Rank:3
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----TCCATAACAT---
NNGATCTAGAACCTNNN

PB0120.1_Foxj1_2/Jaspar

Match Rank:4
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TCCATAACAT---
ATGTCACAACAACAC

PB0123.1_Foxl1_2/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TCCATAACAT----
ATATCAAAACAAAACA

PH0078.1_Hoxd13/Jaspar

Match Rank:6
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---TCCATAACAT---
CTACCAATAAAATTCT

PB0098.1_Zfp410_1/Jaspar

Match Rank:7
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TCCATAACAT----
NNNTCCATCCCATAANN

PB0141.1_Isgf3g_2/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TCCATAACAT-----
-GCAAAACATTACTA

PB0119.1_Foxa2_2/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TCCATAACAT----
AAAAATAACAAACGG

PH0075.1_Hoxd10/Jaspar

Match Rank:10
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TCCATAACAT----
AATGCAATAAAATTTAT