Information for motif31


Reverse Opposite:

p-value:1e-6
log p-value:-1.435e+01
Information Content per bp:1.968
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.00%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets454.7 +/- 244.7bp
Average Position of motif in Background606.4 +/- 363.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0059.1_Six6_1/Jaspar

Match Rank:1
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----GGCTATCC-----
AATAGGGTATCATATAT

PH0166.1_Six6_2/Jaspar

Match Rank:2
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----GGCTATCC-----
AATAGGGTATCAATATT

PH0161.1_Six1/Jaspar

Match Rank:3
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----GGCTATCC-----
GATGGGGTATCATTTTT

PH0163.1_Six3/Jaspar

Match Rank:4
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----GGCTATCC-----
GATAGGGTATCACTAAT

PH0162.1_Six2/Jaspar

Match Rank:5
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----GGCTATCC-----
AATGGGGTATCACGTTT

PH0165.1_Six6_1/Jaspar

Match Rank:6
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----GGCTATCC-----
AATAGGGTATCAATTAT

MA0101.1_REL/Jaspar

Match Rank:7
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GGCTATCC
GGGGATTTCC

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GGCTATCC-
AAGGATATNTN

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GGCTATCC
NGCTN---

MA0107.1_RELA/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GGCTATCC
GGGAATTTCC