Information for motif32


Reverse Opposite:

p-value:1e-5
log p-value:-1.355e+01
Information Content per bp:1.759
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.60%
Number of Background Sequences with motif9.4
Percentage of Background Sequences with motif0.38%
Average Position of motif in Targets270.5 +/- 254.4bp
Average Position of motif in Background310.4 +/- 313.1bp
Strand Bias (log2 ratio + to - strand density)-2.2
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GGTAGGTAGGTA-
--CAGGTAAGTAT

PB0155.1_Osr2_2/Jaspar

Match Rank:2
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GGTAGGTAGGTA--
NNTGTAGGTAGCANNT

MA0124.1_NKX3-1/Jaspar

Match Rank:3
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GGTAGGTAGGTA
--TAAGTAT---

PB0154.1_Osr1_2/Jaspar

Match Rank:4
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GGTAGGTAGGTA--
NNNTTAGGTAGCNTNT

PB0029.1_Hic1_1/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GGTAGGTAGGTA----
NGTAGGTTGGCATNNN

MA0032.1_FOXC1/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GGTAGGTAGGTA
GGTAAGTA----

PB0159.1_Rfx4_2/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GGTAGGTAGGTA-
NNNGTAACTANGNNA

MA0009.1_T/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GGTAGGTAGGTA
-CTAGGTGTGAA

MA0149.1_EWSR1-FLI1/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GGTAGGTAGGTA------
GGAAGGAAGGAAGGAAGG

PB0054.1_Rfx3_1/Jaspar

Match Rank:10
Score:0.53
Offset:-6
Orientation:reverse strand
Alignment:------GGTAGGTAGGTA-----
NTNNNNNGTTGCTANGGNNCANA