Information for motif33


Reverse Opposite:

p-value:1e-5
log p-value:-1.338e+01
Information Content per bp:1.905
Number of Target Sequences with motif88.0
Percentage of Target Sequences with motif8.81%
Number of Background Sequences with motif129.9
Percentage of Background Sequences with motif5.23%
Average Position of motif in Targets384.0 +/- 294.8bp
Average Position of motif in Background433.2 +/- 344.7bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0041.1_Hmx1/Jaspar

Match Rank:1
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GAGCAACT-------
ACAAGCAATTAATGAAT

CEBP(bZIP)/CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GAGCAACT
ATTGCGCAAC-

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GAGCAACT-
SCCTAGCAACAG

PB0058.1_Sfpi1_1/Jaspar

Match Rank:4
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----GAGCAACT--
TTAAGAGGAAGTTA

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GAGCAACT-
AGAGGAAGTG

PB0149.1_Myb_2/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GAGCAACT-------
CGACCAACTGCCATGC

PB0003.1_Ascl2_1/Jaspar

Match Rank:7
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GAGCAACT------
NNNNAGCAGCTGCTGAN

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:8
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----GAGCAACT--
CCGCATAGCAACGGA

PH0024.1_Dlx5/Jaspar

Match Rank:9
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GAGCAACT-------
GGGGTAATTAGCTCTG

PB0150.1_Mybl1_2/Jaspar

Match Rank:10
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GAGCAACT------
CGACCAACTGCCGTG