Information for motif37


Reverse Opposite:

p-value:1e-5
log p-value:-1.183e+01
Information Content per bp:1.530
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.00%
Number of Background Sequences with motif4.1
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets329.3 +/- 205.3bp
Average Position of motif in Background388.1 +/- 327.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0163.1_Six3/Jaspar

Match Rank:1
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GGTGAGACTCTA--
ANANGTGATACCCTATN

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:2
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GGTGAGACTCTA
AGGTGTGAAM---

PH0165.1_Six6_1/Jaspar

Match Rank:3
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GGTGAGACTCTA--
ANANNTGATACCCTATN

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GGTGAGACTCTA
CAGGTAAGTAT---

PH0162.1_Six2/Jaspar

Match Rank:5
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GGTGAGACTCTA--
ANANGTGATACCCCATT

PB0059.1_Six6_1/Jaspar

Match Rank:6
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---GGTGAGACTCTA--
ANANNTGATACCCNATN

MA0111.1_Spz1/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GGTGAGACTCTA
GCTGTTACCCT-

PB0203.1_Zfp691_2/Jaspar

Match Rank:8
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GGTGAGACTCTA-----
TACGAGACTCCTCTAAC

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:9
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GGTGAGACTCTA
AGGTGTCA-----

PH0161.1_Six1/Jaspar

Match Rank:10
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---GGTGAGACTCTA--
ANNNATGATACCCCATC