Information for motif38


Reverse Opposite:

p-value:1e-5
log p-value:-1.183e+01
Information Content per bp:1.530
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.00%
Number of Background Sequences with motif4.5
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets422.6 +/- 272.9bp
Average Position of motif in Background366.8 +/- 203.9bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CCTCCGAA
GCTCCG--

STAT6/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:2
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CCTCCGAA
TTCCKNAGAA

PB0092.1_Zbtb7b_1/Jaspar

Match Rank:3
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CCTCCGAA---
AAGCCCCCCAAAAAT

MA0520.1_Stat6/Jaspar

Match Rank:4
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----CCTCCGAA--
CATTTCCTGAGAAAT

PB0077.1_Spdef_1/Jaspar

Match Rank:5
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CCTCCGAA-----
GTACATCCGGATTTTT

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CCTCCGAA
CNGTCCTCCC--

MA0062.2_GABPA/Jaspar

Match Rank:7
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----CCTCCGAA
NCCACTTCCGG-

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CCTCCGAA--
CSTGGGAAAD

Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CCTCCGAA
HACTTCCGGY

MA0028.1_ELK1/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CCTCCGAA--
CTTCCGGNNN