Information for motif39


Reverse Opposite:

p-value:1e-5
log p-value:-1.167e+01
Information Content per bp:1.530
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.20%
Number of Background Sequences with motif7.0
Percentage of Background Sequences with motif0.28%
Average Position of motif in Targets467.3 +/- 375.8bp
Average Position of motif in Background487.7 +/- 315.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Egr2/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:1
Score:0.86
Offset:-2
Orientation:reverse strand
Alignment:--CGCCCACA--
YCCGCCCACGCN

MA0472.1_EGR2/Jaspar

Match Rank:2
Score:0.81
Offset:-4
Orientation:forward strand
Alignment:----CGCCCACA---
CCCCCGCCCACGCAC

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:CGCCCACA--
CRCCCACGCA

PB0076.1_Sp4_1/Jaspar

Match Rank:4
Score:0.71
Offset:-5
Orientation:forward strand
Alignment:-----CGCCCACA----
GGTCCCGCCCCCTTCTC

MA0597.1_THAP1/Jaspar

Match Rank:5
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-CGCCCACA
CTGCCCGCA

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:6
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-CGCCCACA---
NWAACCACADNN

PB0143.1_Klf7_2/Jaspar

Match Rank:7
Score:0.68
Offset:-7
Orientation:forward strand
Alignment:-------CGCCCACA--
AAGCATACGCCCAACTT

PB0010.1_Egr1_1/Jaspar

Match Rank:8
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CGCCCACA----
TCCGCCCCCGCATT

MA0162.2_EGR1/Jaspar

Match Rank:9
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----CGCCCACA--
CCCCCGCCCCCGCC

MA0002.2_RUNX1/Jaspar

Match Rank:10
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CGCCCACA---
AAACCACAGAN