Information for motif40


Reverse Opposite:

p-value:1e-4
log p-value:-1.077e+01
Information Content per bp:1.766
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets446.7 +/- 181.4bp
Average Position of motif in Background185.4 +/- 25.0bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)3.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0198.1_Zfp128_2/Jaspar

Match Rank:1
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TAGATACAGATA--
TGTATATATATACC

MA0033.1_FOXL1/Jaspar

Match Rank:2
Score:0.63
Offset:4
Orientation:forward strand
Alignment:TAGATACAGATA
----TATACATA

MA0042.1_FOXI1/Jaspar

Match Rank:3
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:TAGATACAGATA---
---AAACAAACANNC

PB0080.1_Tbp_1/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TAGATACAGATA----
NANTTATATATAANGN

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:5
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----TAGATACAGATA
CTACTTGGATACGGAAT

MA0035.3_Gata1/Jaspar

Match Rank:6
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:TAGATACAGATA----
-----ANAGATAAGAA

PH0082.1_Irx2/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TAGATACAGATA-----
TAAATACATGTAAAATT

GATA-IR4(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TAGATACAGATA---
NAGATWNBNATCTNN

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:9
Score:0.57
Offset:7
Orientation:forward strand
Alignment:TAGATACAGATA---
-------AGATAASR

Oct2(POU/Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TAGATACAGATA
-ATATGCAAAT-